Classification and Retrieval on Macroinvertebrate Image Databases

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Date

2011

Journal Title

Journal ISSN

Volume Title

Publisher

Pergamon-Elsevier Science Ltd

Open Access Color

Green Open Access

No

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Top 10%
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Top 10%
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Top 10%

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Abstract

Aquatic ecosystems are continuously threatened by a growing number of human induced changes. Macroinvertebrate biomonitoring is particularly efficient in pinpointing the cause-effect structure between slow and subtle changes and their detrimental consequences in aquatic ecosystems. The greatest obstacle to implementing efficient biomonitoring is currently the cost-intensive human expert taxonomic identification of samples. While there is evidence that automated recognition techniques can match human taxa identification accuracy at greatly reduced costs, so far the development of automated identification techniques for aquatic organisms has been minimal. In this paper, we focus on advancing classification and data retrieval that are instrumental when processing large macroinvertebrate image datasets. To accomplish this for routine biomonitoring, in this paper we shall investigate the feasibility of automated river macroinvertebrate classification and retrieval with high precision. Besides the state-of-the-art classifiers such as Support Vector Machines (SVMs) and Bayesian Classifiers (BCs), the focus is particularly drawn on feed-forward artificial neural networks (ANNs), namely multilayer perceptrons (MLPs) and radial basis function networks (RBFNs). Since both ANN types have been proclaimed superior by different investigations even for the same benchmark problems, we shall first show that the main reason for this ambiguity lies in the static and rather poor comparison methodologies applied in most earlier works. Especially the most common drawback occurs due to the limited evaluation of the ANN performances over just one or few network architecture(s). Therefore, in this study, an extensive evaluation of each classifier performance over an ANN architecture space is performed. The best classifier among all, which is trained over a dataset of river macroinvertebrate specimens, is then used in the MUVIS framework for the efficient search and retrieval of particular macroinvertebrate peculiars. Classification and retrieval results present high accuracy and can match an experts' ability for taxonomic identification. (C) 2011 Elsevier Ltd. All rights reserved.

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Keywords

Biomonitoring, Classification, Radial basis function networks, Multilayer perceptrons, Bayesian Networks, Support Vector Machines, Benthic macroinvertebrate, Identification, Segmentation, Features, Nymph, Aquatic Organisms, Insecta, Databases, Factual, ta1172, 333, Rivers, Support Vector Machines, Image Processing, Computer-Assisted, Animals, Multilayer perceptrons, Ecosystem, ta113, Benthic macroinvertebrate, ta112, ta213, Bayes Theorem, Classification, Radial basis function networks, 004, Biomonitoring, Bayesian Networks, Neural Networks, Computer, Algorithms, Environmental Monitoring

Fields of Science

02 engineering and technology, 03 medical and health sciences, 0302 clinical medicine, 0202 electrical engineering, electronic engineering, information engineering

Citation

WoS Q

Q1

Scopus Q

Q1
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OpenCitations Citation Count
35

Source

Computers in Bıology And Medıcıne

Volume

41

Issue

7

Start Page

463

End Page

472
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CrossRef : 35

Scopus : 37

PubMed : 3

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Mendeley Readers : 42

SCOPUS™ Citations

37

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Web of Science™ Citations

33

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3

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