Please use this identifier to cite or link to this item: https://hdl.handle.net/20.500.14365/2272
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dc.contributor.authorSelli, Cigdem-
dc.contributor.authorErac, Yasemin-
dc.contributor.authorTosun, Metiner-
dc.date.accessioned2023-06-16T14:38:42Z-
dc.date.available2023-06-16T14:38:42Z-
dc.date.issued2016-
dc.identifier.issn1790-045X-
dc.identifier.issn2241-5793-
dc.identifier.urihttps://doi.org/10.1186/s40709-016-0057-4-
dc.identifier.urihttps://hdl.handle.net/20.500.14365/2272-
dc.description.abstractBackground: Real-time cellular analysis systems enable impedance-based label-free and dynamic monitoring of various cellular events such as proliferation. In this study, we describe the effects of initial cell seeding density on the anti-proliferative effects of transient gene silencing monitored via real-time cellular analysis. We monitored the realtime changes in proliferation of Huh7 hepatocellular carcinoma and A7r5 vascular smooth muscle cells with different initial seeding densities following transient receptor potential canonical 1 (TRPC1) silencing using xCELLigence system. Huh7 and A7r5 cells were seeded on E-plate 96 at 10,000, 5000, 1250 and 5000, 2500 cells well(-1), respectively, following silencing vector transfection. The inhibitory effects of transient silencing on cell proliferation monitored every 30 min for 72 h. Results: TRPC1 silencing did not inhibit the proliferation rates of Huh7 cells at 10,000 cells well(-1) seeding density. However, a significant anti-proliferative effect was observed at 1250 cells well(-1) density at each time point throughout 72 h. Furthermore, significant inhibitory effects on A7r5 proliferation were observed at both 5000 and 2500 cells well(-1) for 72 h. Conclusions: Data suggest that the effects of transient silencing on cell proliferation differ depending on the initial cell seeding density. While high seeding densities mask the significant changes in proliferation, the inhibitory effects of silencing become apparent at lower seeding densities as the entry into log phase is delayed. Using the optimal initial seeding density is crucial when studying the effects of transient gene silencing. In addition, the results suggest that TRPC1 may contribute to proliferation and phenotypic switching of vascular smooth muscle cells.en_US
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TUBITAK Research Project) [108S072]; Novartis (Turkey); Research Infrastructure Project, The State Planning Organization of Turkey (DPT) [2009K120640]en_US
dc.description.sponsorshipThis work was supported by The Scientific and Technological Research Council of Turkey (TUBITAK Research Project, 108S072) and Novartis (Turkey) to MT. The xCELLigence system was purchased within the Research Infrastructure Project, The State Planning Organization of Turkey (DPT, 2009K120640).en_US
dc.language.isoenen_US
dc.publisherBmcen_US
dc.relation.ispartofJournal of Bıologıcal Research-Thessalonıkıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectA7r5en_US
dc.subjectCell densityen_US
dc.subjectHuh7en_US
dc.subjectImpedanceen_US
dc.subjectRTCAen_US
dc.subjectOperated Calcium-Entryen_US
dc.subjectSmooth-Muscleen_US
dc.subjectLabel-Freeen_US
dc.subjectProliferationen_US
dc.subjectTrpc1en_US
dc.subjectExpressionen_US
dc.subjectChannelen_US
dc.subjectGrowthen_US
dc.subjectAssayen_US
dc.subjectCardiomyocytesen_US
dc.titleEffects of cell seeding density on real-time monitoring of anti-proliferative effects of transient gene silencingen_US
dc.typeArticleen_US
dc.identifier.doi10.1186/s40709-016-0057-4-
dc.identifier.pmid27981039en_US
dc.identifier.scopus2-s2.0-85044459865en_US
dc.departmentİzmir Ekonomi Üniversitesien_US
dc.authoridSelli, Cigdem/0000-0001-5330-8568-
dc.authoridTosun, Metiner/0000-0002-2233-5720-
dc.authorwosidSelli, Cigdem/AAA-3571-2020-
dc.authorwosidTosun, Metiner/B-2683-2018-
dc.authorscopusid16204002900-
dc.authorscopusid16202622800-
dc.authorscopusid7003740001-
dc.identifier.volume23en_US
dc.identifier.wosWOS:000390112500001en_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.identifier.scopusqualityQ2-
dc.identifier.wosqualityQ2-
item.cerifentitytypePublications-
item.openairecristypehttp://purl.org/coar/resource_type/c_18cf-
item.grantfulltextopen-
item.fulltextWith Fulltext-
item.languageiso639-1en-
item.openairetypeArticle-
crisitem.author.dept09.04. Surgical Sciences-
Appears in Collections:PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection
Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
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