Please use this identifier to cite or link to this item: https://hdl.handle.net/20.500.14365/5783
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dc.contributor.authorSavas, Ege Gokce-
dc.contributor.authorSurer, Seniz Inanc-
dc.contributor.authorSipahi, Murat-
dc.contributor.authorKeles, Didem-
dc.contributor.authorOktay, Gulgun-
dc.date.accessioned2025-01-25T17:04:15Z-
dc.date.available2025-01-25T17:04:15Z-
dc.date.issued2025-
dc.identifier.issn0301-4851-
dc.identifier.issn1573-4978-
dc.identifier.urihttps://doi.org/10.1007/s11033-024-10158-8-
dc.identifier.urihttps://hdl.handle.net/20.500.14365/5783-
dc.description.abstractBackgroundCollagenases, a subgroup of matrix metalloproteinases (MMPs), play crucial roles in local invasion and metastasis in cancer. While substrate zymography and in situ zymography are commonly used to analyze the collagenases, traditional techniques have limitations in determining their local activities in vitro.ObjectivesWe aimed to develop a new "cell in situ collagen zymography" technique to enhance the efficiency of studying local collagenase activities in vitro.MethodsWe utilized human thyroid cancer cell lines (8505 C, B-CPAP, FTC-133) and normal follicular thyroid cell line (Nhty-ori-3-1). We compared collagenase levels across these cell lines and selected 8505 C as a model due to its highest collagenase activity. We optimized factors including (i) fixation method (methanol, ethanol and zinc), (ii) dye-quenched (DQ) collagen concentration and (iii) collagen gel configuration. For gel configuration, cells were seeded under, on the top of, or between (sandwich) collagen gel layers. As controls, enzymatic activity was suppressed in the presence of EDTA, piroxicam and matrix metalloproteinase 8 inhibitor I. The optimized method was also applied to BCPAP, FTC-133, and Nthy-ori-3-1.ResultsOur optimization process revealed that that the best visualization of collagenase activity in 8505 C was provided by the "sandwich model" of gel, containing 25 mu g/mL of DQ-collagen with 100% cold methanol fixation. We confirmed the optimized method's applicability in other thyroid cell lines. The use of inhibitors validated the specificity of the fluorescent signal to MMP activity.ConclusionThe innovative "cell in situ collagen zymography" technique offers an efficient, cost-effective, and rapid method for analyzing local collagenase activities in vitro.en_US
dc.description.sponsorshipDokuz Eylul University Scientific Research Project Coordination Unit [5.16.1]en_US
dc.description.sponsorshipEge Gokce Savas drew the figures using Linearity Curve software (5.16.1). We appreciate Marcel Tisch for publicly sharing the 96-well plate, cells, and magnifier icons, through Bioicons open-source library, which were used in this work.en_US
dc.language.isoenen_US
dc.publisherSpringeren_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectIn Situ Zymographyen_US
dc.subjectMatrix Metalloproteinasesen_US
dc.subjectCollagenasesen_US
dc.subjectGelatinasesen_US
dc.subjectDq-Collagenen_US
dc.subjectThyroid Canceren_US
dc.titleA Simple and Efficient "Cell in Situ Collagen Zymography" Technique To Evaluate Cellular Collagenase Activities in Thyroid Cancer Cell Linesen_US
dc.typeArticleen_US
dc.identifier.doi10.1007/s11033-024-10158-8-
dc.identifier.pmid39673649-
dc.identifier.scopus2-s2.0-85211912886-
dc.departmentİzmir Ekonomi Üniversitesien_US
dc.authorwosidKeleş, Didem/F-1643-2016-
dc.authorwosidInanc-Surer, Seniz/R-6431-2017-
dc.authorscopusid59470687600-
dc.authorscopusid57267749700-
dc.authorscopusid56502085400-
dc.authorscopusid54382004200-
dc.authorscopusid6603848627-
dc.identifier.volume52en_US
dc.identifier.issue1en_US
dc.identifier.wosWOS:001377251400001-
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.identifier.scopusqualityQ3-
dc.identifier.wosqualityQ3-
dc.description.woscitationindexScience Citation Index Expanded-
item.grantfulltextnone-
item.languageiso639-1en-
item.cerifentitytypePublications-
item.openairetypeArticle-
item.openairecristypehttp://purl.org/coar/resource_type/c_18cf-
item.fulltextNo Fulltext-
crisitem.author.dept15.06. Medical Laboratory Techniques-
Appears in Collections:PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection
Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
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