Please use this identifier to cite or link to this item:
https://hdl.handle.net/20.500.14365/5783
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DC Field | Value | Language |
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dc.contributor.author | Savas, Ege Gokce | - |
dc.contributor.author | Surer, Seniz Inanc | - |
dc.contributor.author | Sipahi, Murat | - |
dc.contributor.author | Keles, Didem | - |
dc.contributor.author | Oktay, Gulgun | - |
dc.date.accessioned | 2025-01-25T17:04:15Z | - |
dc.date.available | 2025-01-25T17:04:15Z | - |
dc.date.issued | 2025 | - |
dc.identifier.issn | 0301-4851 | - |
dc.identifier.issn | 1573-4978 | - |
dc.identifier.uri | https://doi.org/10.1007/s11033-024-10158-8 | - |
dc.identifier.uri | https://hdl.handle.net/20.500.14365/5783 | - |
dc.description.abstract | BackgroundCollagenases, a subgroup of matrix metalloproteinases (MMPs), play crucial roles in local invasion and metastasis in cancer. While substrate zymography and in situ zymography are commonly used to analyze the collagenases, traditional techniques have limitations in determining their local activities in vitro.ObjectivesWe aimed to develop a new "cell in situ collagen zymography" technique to enhance the efficiency of studying local collagenase activities in vitro.MethodsWe utilized human thyroid cancer cell lines (8505 C, B-CPAP, FTC-133) and normal follicular thyroid cell line (Nhty-ori-3-1). We compared collagenase levels across these cell lines and selected 8505 C as a model due to its highest collagenase activity. We optimized factors including (i) fixation method (methanol, ethanol and zinc), (ii) dye-quenched (DQ) collagen concentration and (iii) collagen gel configuration. For gel configuration, cells were seeded under, on the top of, or between (sandwich) collagen gel layers. As controls, enzymatic activity was suppressed in the presence of EDTA, piroxicam and matrix metalloproteinase 8 inhibitor I. The optimized method was also applied to BCPAP, FTC-133, and Nthy-ori-3-1.ResultsOur optimization process revealed that that the best visualization of collagenase activity in 8505 C was provided by the "sandwich model" of gel, containing 25 mu g/mL of DQ-collagen with 100% cold methanol fixation. We confirmed the optimized method's applicability in other thyroid cell lines. The use of inhibitors validated the specificity of the fluorescent signal to MMP activity.ConclusionThe innovative "cell in situ collagen zymography" technique offers an efficient, cost-effective, and rapid method for analyzing local collagenase activities in vitro. | en_US |
dc.description.sponsorship | Dokuz Eylul University Scientific Research Project Coordination Unit [5.16.1] | en_US |
dc.description.sponsorship | Ege Gokce Savas drew the figures using Linearity Curve software (5.16.1). We appreciate Marcel Tisch for publicly sharing the 96-well plate, cells, and magnifier icons, through Bioicons open-source library, which were used in this work. | en_US |
dc.language.iso | en | en_US |
dc.publisher | Springer | en_US |
dc.rights | info:eu-repo/semantics/closedAccess | en_US |
dc.subject | In Situ Zymography | en_US |
dc.subject | Matrix Metalloproteinases | en_US |
dc.subject | Collagenases | en_US |
dc.subject | Gelatinases | en_US |
dc.subject | Dq-Collagen | en_US |
dc.subject | Thyroid Cancer | en_US |
dc.title | A Simple and Efficient "Cell in Situ Collagen Zymography" Technique To Evaluate Cellular Collagenase Activities in Thyroid Cancer Cell Lines | en_US |
dc.type | Article | en_US |
dc.identifier.doi | 10.1007/s11033-024-10158-8 | - |
dc.identifier.pmid | 39673649 | - |
dc.identifier.scopus | 2-s2.0-85211912886 | - |
dc.department | İzmir Ekonomi Üniversitesi | en_US |
dc.authorwosid | Keleş, Didem/F-1643-2016 | - |
dc.authorwosid | Inanc-Surer, Seniz/R-6431-2017 | - |
dc.authorscopusid | 59470687600 | - |
dc.authorscopusid | 57267749700 | - |
dc.authorscopusid | 56502085400 | - |
dc.authorscopusid | 54382004200 | - |
dc.authorscopusid | 6603848627 | - |
dc.identifier.volume | 52 | en_US |
dc.identifier.issue | 1 | en_US |
dc.identifier.wos | WOS:001377251400001 | - |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
dc.identifier.scopusquality | Q3 | - |
dc.identifier.wosquality | Q3 | - |
dc.description.woscitationindex | Science Citation Index Expanded | - |
item.grantfulltext | none | - |
item.languageiso639-1 | en | - |
item.cerifentitytype | Publications | - |
item.openairetype | Article | - |
item.openairecristype | http://purl.org/coar/resource_type/c_18cf | - |
item.fulltext | No Fulltext | - |
crisitem.author.dept | 15.06. Medical Laboratory Techniques | - |
Appears in Collections: | PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection |
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