Novel Tgase2 Allosteric Site Inhibitors: a Computational Study

dc.contributor.author Şahay, G.E.
dc.contributor.author Kızılkanat, N.
dc.contributor.author Sezgin, S.
dc.contributor.author Portakal, H.S.
dc.date.accessioned 2025-01-25T17:06:39Z
dc.date.available 2025-01-25T17:06:39Z
dc.date.issued 2024
dc.description.abstract Tranglutaminase-2 (Tgase2) is one of the primary Transglutaminase enzyme family members having a significant role in Ca2+ -dependent and -independent post-translational modifications. It has been previously reported that Tgase2 has significant regulatory roles over metabolic functions such as signaling pathways, inflammatory response, and wound healing. In particular, many cancer types’ prognosis includes over Tgase2 activity since it might induce metastasis through regulating crosslinking of extracellular matrix (ECM) proteins, and tumor proliferation via leading spheroid formation. Considering these fundamentals, discovery of novel chemical compounds to inhibit Tgase2 activity might be a strong approach in cancer treatment. Furthermore, it’s known that Tgase2 activity might be inhibited through blocking its allosteric site with chemical compounds. As such, a drug library including 12,111 small compounds were virtually screened to allosteric site of Tgase2. The study has been validated by repetition the strategy with previously discovered inhibitors. Allosteric and active sites of Tgase2 have been demonstrated with protein-protein docking technique. Eventually, recently discovered ligands have been characterized according to their ADME and toxicity profiles. Results have demonstrated that Eltrombopag, Talniflumate, and Lumacaftor drugs might be repurposed in the inhibition of Tgase2 since that they exhibit high binding affinity, ADME, and toxicity properties comparing the known inhibitors. © (2024), (DergiPark). All Rights Reserved. en_US
dc.identifier.doi 10.33435/TCANDTC.1441494
dc.identifier.issn 2587-1722
dc.identifier.scopus 2-s2.0-85214020118
dc.identifier.uri https://doi.org/10.33435/TCANDTC.1441494
dc.identifier.uri https://hdl.handle.net/20.500.14365/5847
dc.language.iso en en_US
dc.publisher DergiPark en_US
dc.relation.ispartof Turkish Computational and Theoretical Chemistry en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Adme And Toxicity en_US
dc.subject Molecular Docking en_US
dc.subject Protein-Protein Docking en_US
dc.subject Tgase2 en_US
dc.subject Transglutaminase en_US
dc.subject Virtual Drug Screening en_US
dc.title Novel Tgase2 Allosteric Site Inhibitors: a Computational Study en_US
dc.type Article en_US
dspace.entity.type Publication
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gdc.author.scopusid 57220586907
gdc.bip.impulseclass C5
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gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Ekonomi Üniversitesi en_US
gdc.description.departmenttemp Şahay G.E., Genetics and Bioengineering Department, Izmir University of Economics, Turkey; Kızılkanat N., Genetics and Bioengineering Department, Izmir University of Economics, Turkey; Sezgin S., Genetics and Bioengineering Department, Izmir University of Economics, Turkey; Portakal H.S., Genetics and Bioengineering Department, Izmir University of Economics, Turkey en_US
gdc.description.endpage 92 en_US
gdc.description.issue 4 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q4
gdc.description.startpage 83 en_US
gdc.description.volume 8 en_US
gdc.description.wosquality N/A
gdc.identifier.openalex W4400834288
gdc.index.type Scopus
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gdc.oaire.keywords Moleküler Görüntüleme
gdc.oaire.keywords Tgase2;Transglutaminase;Molecular Docking;Virtual Drug Screening;Protein-Protein Docking;ADME and Toxicity
gdc.oaire.keywords Molecular Imaging
gdc.oaire.popularity 2.4744335E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
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gdc.virtual.author Portakal, Hüseyin Saygın
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