The Effect of Automated Taxa Identification Errors on Biological Indices

dc.contributor.author Arje, Johanna
dc.contributor.author Karkkainen, Salme
dc.contributor.author Meissner, Kristian
dc.contributor.author Iosifidis, Alexandros
dc.contributor.author İnce, Türker
dc.contributor.author Gabbouj, Moncef
dc.contributor.author Kiranyaz, Serkan
dc.date.accessioned 2023-06-16T12:59:26Z
dc.date.available 2023-06-16T12:59:26Z
dc.date.issued 2017
dc.description.abstract In benthic macroinvertebrate biomonitoring systems, the target is to determine the status of ecosystems based on several biological indices. To increase cost-efficiency, computer-based taxa identification for image data has recently been developed. Taxa identification errors can, however, have strong effects on the indices and thus on the determination of the ecological status. In order to shift the biomonitoring process towards automated expert systems, we need a clear understanding on the bias caused by automation. In this paper, we examine eleven classification methods in the case of macroinvertebrate image data and show how their classification errors propagate into different biological indices. We evaluate 14 richness, diversity, dominance and similarity indices commonly used in biomonitoring. Besides the error rate of the classification method, we discuss the potential effect of different types of identification errors. Finally, we provide recommendations on indices that are least affected by the automatic identification errors and could be used in automated biomonitoring. (C) 2016 Elsevier Ltd. All rights reserved. en_US
dc.description.sponsorship Academy of Finland [288584, 295854, 289364, 289076, 289104]; Ellen and Artturi Nyyssonen foundation; Academy of Finland (AKA) [289104, 289076, 289364, 295854] Funding Source: Academy of Finland (AKA) en_US
dc.description.sponsorship We thank the Academy of Finland (projects 288584 (Kiranyaz), 295854 (Iosidis), 289364 (Gabbouj), 289076 (Arje, Karkkainen) and 289104 (Meissner)) and the Ellen and Artturi Nyyssonen foundation for the grant of Arje. The authors would like to thank Marko Vikstedt for the preparation of the monitoring data and Tuomas Turpeinen for the image data. We kindly thank Antti Penttinen for fruitful discussions and support. en_US
dc.identifier.doi 10.1016/j.eswa.2016.12.015
dc.identifier.issn 0957-4174
dc.identifier.issn 1873-6793
dc.identifier.scopus 2-s2.0-85007565972
dc.identifier.uri https://doi.org/10.1016/j.eswa.2016.12.015
dc.identifier.uri https://hdl.handle.net/20.500.14365/1217
dc.language.iso en en_US
dc.publisher Pergamon-Elsevier Science Ltd en_US
dc.relation.ispartof Expert Systems Wıth Applıcatıons en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Biomonitoring en_US
dc.subject Classification error en_US
dc.subject Diversity: error propagation en_US
dc.subject Identification en_US
dc.subject Similarity en_US
dc.subject Percent Model Affinity en_US
dc.subject Citizen-Science en_US
dc.subject Classification en_US
dc.subject Diversity en_US
dc.subject Misclassification en_US
dc.subject Dimensionality en_US
dc.title The Effect of Automated Taxa Identification Errors on Biological Indices en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Gabbouj, Moncef/0000-0002-9788-2323
gdc.author.id İnce, Türker/0000-0002-8495-8958
gdc.author.id kiranyaz, serkan/0000-0003-1551-3397
gdc.author.id Iosifidis, Alexandros/0000-0003-4807-1345
gdc.author.id Meissner, Kristian/0000-0001-6316-8554
gdc.author.id Arje, Johanna/0000-0003-0710-9044
gdc.author.scopusid 6601908750
gdc.author.scopusid 56021103800
gdc.author.scopusid 7102350223
gdc.author.scopusid 36720841400
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gdc.author.scopusid 7005332419
gdc.author.scopusid 7801632948
gdc.author.wosid Gabbouj, Moncef/G-4293-2014
gdc.author.wosid Kiranyaz, Serkan/AAK-1416-2021
gdc.author.wosid Meissner, Kristian/E-8390-2014
gdc.author.wosid Iosifidis, Alexandros/G-2433-2013
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gdc.coar.access open access
gdc.coar.type text::journal::journal article
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gdc.description.department İzmir Ekonomi Üniversitesi en_US
gdc.description.departmenttemp [Arje, Johanna; Karkkainen, Salme] Univ Jyvaskyla, Dept Math & Stat, POB 35 MaD, Jyvaskyla 40014, Finland; [Meissner, Kristian] Finnish Environm Inst, SYKE, Jyvaskyla Off, Freshwater Ctr, Survontie 9A, Jyvaskyla 40500, Finland; [Iosifidis, Alexandros; Gabbouj, Moncef] Tampere Univ Technol, Dept Signal Proc, POB 553, FI-33101 Tampere, Finland; [İnce, Türker] Izmir Univ Econ Turkey, Dept Elect & Elect Engn, Sakarya St 156, TR-35330 Izmir, Turkey; [Kiranyaz, Serkan] Qatar Univ, Coll Engn, Elect Engn, POB 2713, Doha, Qatar en_US
gdc.description.endpage 120 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q1
gdc.description.startpage 108 en_US
gdc.description.volume 72 en_US
gdc.description.wosquality Q1
gdc.identifier.openalex W2564295668
gdc.identifier.wos WOS:000392770900009
gdc.index.type WoS
gdc.index.type Scopus
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gdc.oaire.keywords Identification
gdc.oaire.keywords ta112
gdc.oaire.keywords Classification error
gdc.oaire.keywords Statistics
gdc.oaire.keywords Similarity
gdc.oaire.keywords samanlaisuus
gdc.oaire.keywords diversity: error propagation
gdc.oaire.keywords Diversity: error propagation
gdc.oaire.keywords Biomonitoring
gdc.oaire.keywords biomonitoring
gdc.oaire.keywords identification
gdc.oaire.keywords classification error
gdc.oaire.keywords error propagation [Diversity]
gdc.oaire.keywords Tilastotiede
gdc.oaire.keywords ta218
gdc.oaire.popularity 2.360765E-9
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gdc.oaire.sciencefields 0106 biological sciences
gdc.oaire.sciencefields 02 engineering and technology
gdc.oaire.sciencefields 01 natural sciences
gdc.oaire.sciencefields 0202 electrical engineering, electronic engineering, information engineering
gdc.openalex.collaboration International
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gdc.opencitations.count 6
gdc.plumx.crossrefcites 4
gdc.plumx.mendeley 26
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gdc.scopus.citedcount 5
gdc.virtual.author İnce, Türker
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