The Effect of Automated Taxa Identification Errors on Biological Indices
| dc.contributor.author | Arje, Johanna | |
| dc.contributor.author | Karkkainen, Salme | |
| dc.contributor.author | Meissner, Kristian | |
| dc.contributor.author | Iosifidis, Alexandros | |
| dc.contributor.author | İnce, Türker | |
| dc.contributor.author | Gabbouj, Moncef | |
| dc.contributor.author | Kiranyaz, Serkan | |
| dc.date.accessioned | 2023-06-16T12:59:26Z | |
| dc.date.available | 2023-06-16T12:59:26Z | |
| dc.date.issued | 2017 | |
| dc.description.abstract | In benthic macroinvertebrate biomonitoring systems, the target is to determine the status of ecosystems based on several biological indices. To increase cost-efficiency, computer-based taxa identification for image data has recently been developed. Taxa identification errors can, however, have strong effects on the indices and thus on the determination of the ecological status. In order to shift the biomonitoring process towards automated expert systems, we need a clear understanding on the bias caused by automation. In this paper, we examine eleven classification methods in the case of macroinvertebrate image data and show how their classification errors propagate into different biological indices. We evaluate 14 richness, diversity, dominance and similarity indices commonly used in biomonitoring. Besides the error rate of the classification method, we discuss the potential effect of different types of identification errors. Finally, we provide recommendations on indices that are least affected by the automatic identification errors and could be used in automated biomonitoring. (C) 2016 Elsevier Ltd. All rights reserved. | en_US |
| dc.description.sponsorship | Academy of Finland [288584, 295854, 289364, 289076, 289104]; Ellen and Artturi Nyyssonen foundation; Academy of Finland (AKA) [289104, 289076, 289364, 295854] Funding Source: Academy of Finland (AKA) | en_US |
| dc.description.sponsorship | We thank the Academy of Finland (projects 288584 (Kiranyaz), 295854 (Iosidis), 289364 (Gabbouj), 289076 (Arje, Karkkainen) and 289104 (Meissner)) and the Ellen and Artturi Nyyssonen foundation for the grant of Arje. The authors would like to thank Marko Vikstedt for the preparation of the monitoring data and Tuomas Turpeinen for the image data. We kindly thank Antti Penttinen for fruitful discussions and support. | en_US |
| dc.identifier.doi | 10.1016/j.eswa.2016.12.015 | |
| dc.identifier.issn | 0957-4174 | |
| dc.identifier.issn | 1873-6793 | |
| dc.identifier.scopus | 2-s2.0-85007565972 | |
| dc.identifier.uri | https://doi.org/10.1016/j.eswa.2016.12.015 | |
| dc.identifier.uri | https://hdl.handle.net/20.500.14365/1217 | |
| dc.language.iso | en | en_US |
| dc.publisher | Pergamon-Elsevier Science Ltd | en_US |
| dc.relation.ispartof | Expert Systems Wıth Applıcatıons | en_US |
| dc.rights | info:eu-repo/semantics/openAccess | en_US |
| dc.subject | Biomonitoring | en_US |
| dc.subject | Classification error | en_US |
| dc.subject | Diversity: error propagation | en_US |
| dc.subject | Identification | en_US |
| dc.subject | Similarity | en_US |
| dc.subject | Percent Model Affinity | en_US |
| dc.subject | Citizen-Science | en_US |
| dc.subject | Classification | en_US |
| dc.subject | Diversity | en_US |
| dc.subject | Misclassification | en_US |
| dc.subject | Dimensionality | en_US |
| dc.title | The Effect of Automated Taxa Identification Errors on Biological Indices | en_US |
| dc.type | Article | en_US |
| dspace.entity.type | Publication | |
| gdc.author.id | Gabbouj, Moncef/0000-0002-9788-2323 | |
| gdc.author.id | İnce, Türker/0000-0002-8495-8958 | |
| gdc.author.id | kiranyaz, serkan/0000-0003-1551-3397 | |
| gdc.author.id | Iosifidis, Alexandros/0000-0003-4807-1345 | |
| gdc.author.id | Meissner, Kristian/0000-0001-6316-8554 | |
| gdc.author.id | Arje, Johanna/0000-0003-0710-9044 | |
| gdc.author.scopusid | 6601908750 | |
| gdc.author.scopusid | 56021103800 | |
| gdc.author.scopusid | 7102350223 | |
| gdc.author.scopusid | 36720841400 | |
| gdc.author.scopusid | 56259806600 | |
| gdc.author.scopusid | 7005332419 | |
| gdc.author.scopusid | 7801632948 | |
| gdc.author.wosid | Gabbouj, Moncef/G-4293-2014 | |
| gdc.author.wosid | Kiranyaz, Serkan/AAK-1416-2021 | |
| gdc.author.wosid | Meissner, Kristian/E-8390-2014 | |
| gdc.author.wosid | Iosifidis, Alexandros/G-2433-2013 | |
| gdc.bip.impulseclass | C4 | |
| gdc.bip.influenceclass | C5 | |
| gdc.bip.popularityclass | C5 | |
| gdc.coar.access | open access | |
| gdc.coar.type | text::journal::journal article | |
| gdc.collaboration.industrial | false | |
| gdc.description.department | İzmir Ekonomi Üniversitesi | en_US |
| gdc.description.departmenttemp | [Arje, Johanna; Karkkainen, Salme] Univ Jyvaskyla, Dept Math & Stat, POB 35 MaD, Jyvaskyla 40014, Finland; [Meissner, Kristian] Finnish Environm Inst, SYKE, Jyvaskyla Off, Freshwater Ctr, Survontie 9A, Jyvaskyla 40500, Finland; [Iosifidis, Alexandros; Gabbouj, Moncef] Tampere Univ Technol, Dept Signal Proc, POB 553, FI-33101 Tampere, Finland; [İnce, Türker] Izmir Univ Econ Turkey, Dept Elect & Elect Engn, Sakarya St 156, TR-35330 Izmir, Turkey; [Kiranyaz, Serkan] Qatar Univ, Coll Engn, Elect Engn, POB 2713, Doha, Qatar | en_US |
| gdc.description.endpage | 120 | en_US |
| gdc.description.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
| gdc.description.scopusquality | Q1 | |
| gdc.description.startpage | 108 | en_US |
| gdc.description.volume | 72 | en_US |
| gdc.description.wosquality | Q1 | |
| gdc.identifier.openalex | W2564295668 | |
| gdc.identifier.wos | WOS:000392770900009 | |
| gdc.index.type | WoS | |
| gdc.index.type | Scopus | |
| gdc.oaire.accesstype | BRONZE | |
| gdc.oaire.diamondjournal | false | |
| gdc.oaire.impulse | 5.0 | |
| gdc.oaire.influence | 2.9583533E-9 | |
| gdc.oaire.isgreen | true | |
| gdc.oaire.keywords | Identification | |
| gdc.oaire.keywords | ta112 | |
| gdc.oaire.keywords | Classification error | |
| gdc.oaire.keywords | Statistics | |
| gdc.oaire.keywords | Similarity | |
| gdc.oaire.keywords | samanlaisuus | |
| gdc.oaire.keywords | diversity: error propagation | |
| gdc.oaire.keywords | Diversity: error propagation | |
| gdc.oaire.keywords | Biomonitoring | |
| gdc.oaire.keywords | biomonitoring | |
| gdc.oaire.keywords | identification | |
| gdc.oaire.keywords | classification error | |
| gdc.oaire.keywords | error propagation [Diversity] | |
| gdc.oaire.keywords | Tilastotiede | |
| gdc.oaire.keywords | ta218 | |
| gdc.oaire.popularity | 2.360765E-9 | |
| gdc.oaire.publicfunded | false | |
| gdc.oaire.sciencefields | 0106 biological sciences | |
| gdc.oaire.sciencefields | 02 engineering and technology | |
| gdc.oaire.sciencefields | 01 natural sciences | |
| gdc.oaire.sciencefields | 0202 electrical engineering, electronic engineering, information engineering | |
| gdc.openalex.collaboration | International | |
| gdc.openalex.fwci | 1.1934 | |
| gdc.openalex.normalizedpercentile | 0.88 | |
| gdc.openalex.toppercent | TOP 10% | |
| gdc.opencitations.count | 6 | |
| gdc.plumx.crossrefcites | 4 | |
| gdc.plumx.mendeley | 26 | |
| gdc.plumx.scopuscites | 5 | |
| gdc.scopus.citedcount | 5 | |
| gdc.virtual.author | İnce, Türker | |
| gdc.wos.citedcount | 5 | |
| relation.isAuthorOfPublication | 620fe4b0-bfe7-4e8f-8157-31e93f36a89b | |
| relation.isAuthorOfPublication.latestForDiscovery | 620fe4b0-bfe7-4e8f-8157-31e93f36a89b | |
| relation.isOrgUnitOfPublication | b02722f0-7082-4d8a-8189-31f0230f0e2f | |
| relation.isOrgUnitOfPublication | 26a7372c-1a5e-42d9-90b6-a3f7d14cad44 | |
| relation.isOrgUnitOfPublication | e9e77e3e-bc94-40a7-9b24-b807b2cd0319 | |
| relation.isOrgUnitOfPublication.latestForDiscovery | b02722f0-7082-4d8a-8189-31f0230f0e2f |
Files
Original bundle
1 - 1 of 1
