Questioning How To Define the Ultra-High Subgroup of Neuroblastoma Patients

dc.contributor.author Demir, A. B.
dc.contributor.author Aktas, S.
dc.contributor.author Altun, Z.
dc.contributor.author Ercetin, P.
dc.contributor.author Aktas, T. C.
dc.contributor.author Olgun, N.
dc.date.accessioned 2023-06-16T14:48:35Z
dc.date.available 2023-06-16T14:48:35Z
dc.date.issued 2021
dc.description.abstract Neuroblastic tumours exhibit heterogeneity, which results in different therapeutic outcomes. Neuroblastoma is categorized into three major risk groups (low, intermediate, high risk). Recent identification of new genes raised the possibility of new biomarkers to identify sub-risk groups. In this retrospective cross-sectional study, we aimed to assess new biomarkers defining the ultra-high-risk subgroup within the high-risk group that differ in clinical situation with very bad prognosis. Twenty-five low- and 29 high-risk groups of patients were analysed for their expression of ALK, ATRX, HIF1a, HIF2a (EPAS), H2AFX, and ETV5 genes at the RNA level. Immunohistochemistry was performed to confirm the protein expression level of ALK. The risk group of patients was determined according to the International Neuroblastoma Risk Group Stratification System. Spearman correlation analysis and Mann-Whitney-U nonparametric test were used to assess the importance of expression levels among the groups. P < 0.05 was considered as significant. Sensitivity of the results was checked by ROC curve analysis. All analysed genes were found to be highly expressed in the high-risk group compared to the low-risk group, except for ETV5. When the ultra-high-risk and high-risk groups were compared, ALK was found to be highly expressed in the ultra-high-risk group. Our results show that ALK may be a candidate gene whose mRNA expression levels can distinguish the ultrahigh-risk subgroup of patients in the high-risk group of patients with non-familial neuroblastoma. en_US
dc.description.sponsorship Research Foundation of Dokuz Eylul University/Izmir [2014.KB.SAG.16]; Turkish Society of Pediatric Oncology Group (TPOG) en_US
dc.description.sponsorship This study was funded by the Research Foundation of Dokuz Eylul University/Izmir (Project No: 2014.KB.SAG.16) and Turkish Society of Pediatric Oncology Group (TPOG). en_US
dc.identifier.issn 0015-5500
dc.identifier.issn 2533-7602
dc.identifier.scopus 2-s2.0-85109955393
dc.identifier.uri https://hdl.handle.net/20.500.14365/2809
dc.language.iso en en_US
dc.publisher Charles Univ Prague, First Faculty Medicine en_US
dc.relation.ispartof Folıa Bıologıca en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject neuroblastoma en_US
dc.subject ultra-high risk en_US
dc.subject ALK expression en_US
dc.subject Salting-Out Procedure en_US
dc.subject Dna Banking en_US
dc.subject Storage en_US
dc.subject Blood en_US
dc.title Questioning How To Define the Ultra-High Subgroup of Neuroblastoma Patients en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Demir, Ayse Banu/0000-0003-4616-8151
gdc.author.wosid Demir, Ayse Banu/E-1142-2017
gdc.bip.impulseclass C4
gdc.bip.influenceclass C5
gdc.bip.popularityclass C4
gdc.coar.access metadata only access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Ekonomi Üniversitesi en_US
gdc.description.departmenttemp [Demir, A. B.; Aktas, S.; Altun, Z.; Ercetin, P.; Aktas, T. C.] Dokuz Eylul Univ, Inst Oncol, Dept Basic Oncol, TR-35330 Izmir, Turkey; [Olgun, N.] Dokuz Eylul Univ, Inst Oncol, Dept Clin Oncol, Izmir, Turkey; [Demir, A. B.] Izmir Univ Econ, Dept Basic Med Sci, Fac Med, Izmir, Turkey en_US
gdc.description.endpage 15 en_US
gdc.description.issue 1 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q4
gdc.description.startpage 1 en_US
gdc.description.volume 67 en_US
gdc.description.wosquality Q4
gdc.identifier.openalex W3184704815
gdc.identifier.pmid 34273261
gdc.identifier.wos WOS:000672501500001
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.accesstype GOLD
gdc.oaire.diamondjournal false
gdc.oaire.impulse 6.0
gdc.oaire.influence 2.8029796E-9
gdc.oaire.isgreen false
gdc.oaire.keywords Neuroblastoma
gdc.oaire.keywords Cross-Sectional Studies
gdc.oaire.keywords Humans
gdc.oaire.keywords Anaplastic Lymphoma Kinase
gdc.oaire.keywords Immunohistochemistry
gdc.oaire.keywords Retrospective Studies
gdc.oaire.popularity 6.833206E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.sciencefields 0302 clinical medicine
gdc.openalex.collaboration National
gdc.openalex.fwci 0.646
gdc.openalex.normalizedpercentile 0.72
gdc.opencitations.count 0
gdc.plumx.mendeley 3
gdc.plumx.pubmedcites 2
gdc.plumx.scopuscites 4
gdc.scopus.citedcount 4
gdc.virtual.author Demir, Ayşe Banu
gdc.wos.citedcount 8
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