Neumodx Random Access Molecular Diagnostic System for Detection and Quantification of Hepatitis B Virus in Clinical Samples

dc.contributor.author Arikan, Ayse
dc.contributor.author Sayan, Murat
dc.contributor.author Doluca, Osman
dc.date.accessioned 2023-06-16T14:41:15Z
dc.date.available 2023-06-16T14:41:15Z
dc.date.issued 2020
dc.description.abstract Introduction: Currently, several molecular assays are available to detect and quantify HBV DNA in clinical samples. We aimed to characterize and compare the clinical performance of newly designed NeuMoDx PCR to the existing artus PCR. Methodology: The plasma HBV DNA levels of 96 clinical and 5 external quality control samples were measured by NeuMoDx and artus assays simultaneously in Kocaeli University, Turkey. The linearity, agreement and the correlation between two assays were determined by Deming regression analysis, Bland-Altman plotting, the chi-square and the relative absolute error statistical analyzes. For all statistical analyzes, the XLSTAT statistical program was used. Results: The mean (standard deviation; SD) age was 45.07 +/- 12.29. HBsAg S/Co median (range) was 4,273.4 +/- 1,138.1 and ALT U/L median (range) was 27 +/- 16. The mean (SD) of HBV DNA was 1.46+E6 +/- 1.0+E4 for NeuMoDx and 1.54+E5 +/- 4.7 + E4 for artus assays. The Deming regression indicates a linear correlation (95% confidence). The chi-square test indicates strong correlation (p < 0.001). Bland-Altman analysis confirms that the measurement difference is acceptable. The relative absolute error analysis for artus showed relatively less and more consistent error rate. With 5 external quality check samples, the statistical significance was low (p = 0.566). Conclusions: The NeuMoDx HBV assay showed an excellent analytical performance by providing a rapid, high throughput technology in a random-access testing system in clinical samples and may be a new solution for viral load quantification in the management of HBV infections. en_US
dc.identifier.doi 10.3855/jidc.12659
dc.identifier.issn 1972-2680
dc.identifier.scopus 2-s2.0-85096081244
dc.identifier.uri https://doi.org/10.3855/jidc.12659
dc.identifier.uri https://hdl.handle.net/20.500.14365/2586
dc.language.iso en en_US
dc.publisher J Infection Developing Countries en_US
dc.relation.ispartof Journal of Infectıon in Developıng Countrıes en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject Chronic hepatitis B en_US
dc.subject hepatitis B virus en_US
dc.subject viral load en_US
dc.subject polymerase chain reaction en_US
dc.subject regression analysis en_US
dc.subject Chi-Square test en_US
dc.subject Hbv Assay en_US
dc.subject Dna en_US
dc.title Neumodx Random Access Molecular Diagnostic System for Detection and Quantification of Hepatitis B Virus in Clinical Samples en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Sayan, Murat/0000-0002-4374-7193
gdc.author.id Sayan, Murat/0000-0002-4374-7193
gdc.author.scopusid 56442224300
gdc.author.scopusid 22036021000
gdc.author.scopusid 36056081300
gdc.author.wosid Sayan, Murat/H-5848-2013
gdc.author.wosid Sayan, Murat/GZM-2963-2022
gdc.author.wosid Doluca, Osman/AAQ-5263-2021
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Ekonomi Üniversitesi en_US
gdc.description.departmenttemp [Arikan, Ayse] Near East Univ, Fac Med, Dept Med Microbiol & Clin Microbiol, Nicosia, Northern Cyprus, Turkey; [Sayan, Murat] Kocaeli Univ, Educ & Res Hosp Kocaeli, PCR Unit, Kocaeli, Turkey; [Arikan, Ayse; Sayan, Murat] Near East Univ, DESAM Inst, Nicosia, Northern Cyprus, Turkey; [Doluca, Osman] Izmir Univ Econ, Dept Biomed Engn, Izmir, Turkey en_US
gdc.description.endpage 1203 en_US
gdc.description.issue 10 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q4
gdc.description.startpage 1197 en_US
gdc.description.volume 14 en_US
gdc.description.wosquality Q4
gdc.identifier.openalex W3099296582
gdc.identifier.pmid 33175717
gdc.identifier.wos WOS:000590262200020
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.accesstype GOLD
gdc.oaire.diamondjournal false
gdc.oaire.impulse 2.0
gdc.oaire.influence 2.7019036E-9
gdc.oaire.isgreen false
gdc.oaire.keywords Adult
gdc.oaire.keywords Male
gdc.oaire.keywords Hepatitis B virus
gdc.oaire.keywords polymerase chain reaction
gdc.oaire.keywords Real-Time Polymerase Chain Reaction
gdc.oaire.keywords Chronic hepatitis B
gdc.oaire.keywords Microbiology
gdc.oaire.keywords regression analysis
gdc.oaire.keywords Hepatitis B, Chronic
gdc.oaire.keywords Humans
gdc.oaire.keywords Internal medicine
gdc.oaire.keywords plasma
gdc.oaire.keywords Hepatitis B Surface Antigens
gdc.oaire.keywords Middle Aged
gdc.oaire.keywords Viral Load
gdc.oaire.keywords Hepatitis B
gdc.oaire.keywords RC31-1245
gdc.oaire.keywords QR1-502
gdc.oaire.keywords viral load
gdc.oaire.keywords High-Throughput Screening Assays
gdc.oaire.keywords Molecular Diagnostic Techniques
gdc.oaire.keywords DNA, Viral
gdc.oaire.keywords Female
gdc.oaire.keywords hepatitis B virus
gdc.oaire.popularity 3.6491588E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.sciencefields 0303 health sciences
gdc.openalex.collaboration International
gdc.openalex.fwci 0.291
gdc.openalex.normalizedpercentile 0.62
gdc.opencitations.count 3
gdc.plumx.mendeley 9
gdc.plumx.pubmedcites 1
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gdc.scopus.citedcount 2
gdc.virtual.author Doluca, Osman
gdc.virtual.author Doluca, Osman
gdc.wos.citedcount 2
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