Effects of Cell Seeding Density on Real-Time Monitoring of Anti-Proliferative Effects of Transient Gene Silencing

dc.contributor.author Selli, Cigdem
dc.contributor.author Erac, Yasemin
dc.contributor.author Tosun, Metiner
dc.date.accessioned 2023-06-16T14:38:42Z
dc.date.available 2023-06-16T14:38:42Z
dc.date.issued 2016
dc.description.abstract Background: Real-time cellular analysis systems enable impedance-based label-free and dynamic monitoring of various cellular events such as proliferation. In this study, we describe the effects of initial cell seeding density on the anti-proliferative effects of transient gene silencing monitored via real-time cellular analysis. We monitored the realtime changes in proliferation of Huh7 hepatocellular carcinoma and A7r5 vascular smooth muscle cells with different initial seeding densities following transient receptor potential canonical 1 (TRPC1) silencing using xCELLigence system. Huh7 and A7r5 cells were seeded on E-plate 96 at 10,000, 5000, 1250 and 5000, 2500 cells well(-1), respectively, following silencing vector transfection. The inhibitory effects of transient silencing on cell proliferation monitored every 30 min for 72 h. Results: TRPC1 silencing did not inhibit the proliferation rates of Huh7 cells at 10,000 cells well(-1) seeding density. However, a significant anti-proliferative effect was observed at 1250 cells well(-1) density at each time point throughout 72 h. Furthermore, significant inhibitory effects on A7r5 proliferation were observed at both 5000 and 2500 cells well(-1) for 72 h. Conclusions: Data suggest that the effects of transient silencing on cell proliferation differ depending on the initial cell seeding density. While high seeding densities mask the significant changes in proliferation, the inhibitory effects of silencing become apparent at lower seeding densities as the entry into log phase is delayed. Using the optimal initial seeding density is crucial when studying the effects of transient gene silencing. In addition, the results suggest that TRPC1 may contribute to proliferation and phenotypic switching of vascular smooth muscle cells. en_US
dc.description.sponsorship Scientific and Technological Research Council of Turkey (TUBITAK Research Project) [108S072]; Novartis (Turkey); Research Infrastructure Project, The State Planning Organization of Turkey (DPT) [2009K120640] en_US
dc.description.sponsorship This work was supported by The Scientific and Technological Research Council of Turkey (TUBITAK Research Project, 108S072) and Novartis (Turkey) to MT. The xCELLigence system was purchased within the Research Infrastructure Project, The State Planning Organization of Turkey (DPT, 2009K120640). en_US
dc.identifier.doi 10.1186/s40709-016-0057-4
dc.identifier.issn 1790-045X
dc.identifier.issn 2241-5793
dc.identifier.scopus 2-s2.0-85044459865
dc.identifier.uri https://doi.org/10.1186/s40709-016-0057-4
dc.identifier.uri https://hdl.handle.net/20.500.14365/2272
dc.language.iso en en_US
dc.publisher Bmc en_US
dc.relation.ispartof Journal of Bıologıcal Research-Thessalonıkı en_US
dc.rights info:eu-repo/semantics/openAccess en_US
dc.subject A7r5 en_US
dc.subject Cell density en_US
dc.subject Huh7 en_US
dc.subject Impedance en_US
dc.subject RTCA en_US
dc.subject Operated Calcium-Entry en_US
dc.subject Smooth-Muscle en_US
dc.subject Label-Free en_US
dc.subject Proliferation en_US
dc.subject Trpc1 en_US
dc.subject Expression en_US
dc.subject Channel en_US
dc.subject Growth en_US
dc.subject Assay en_US
dc.subject Cardiomyocytes en_US
dc.title Effects of Cell Seeding Density on Real-Time Monitoring of Anti-Proliferative Effects of Transient Gene Silencing en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Selli, Cigdem/0000-0001-5330-8568
gdc.author.id Tosun, Metiner/0000-0002-2233-5720
gdc.author.scopusid 16204002900
gdc.author.scopusid 16202622800
gdc.author.scopusid 7003740001
gdc.author.wosid Selli, Cigdem/AAA-3571-2020
gdc.author.wosid Tosun, Metiner/B-2683-2018
gdc.bip.impulseclass C5
gdc.bip.influenceclass C5
gdc.bip.popularityclass C5
gdc.coar.access open access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İzmir Ekonomi Üniversitesi en_US
gdc.description.departmenttemp [Selli, Cigdem] Univ Edinburgh, Inst Genet & Mol Med, Edinburgh Canc Res Ctr, Appl Bioinformat Canc, Crewe Rd South, Edinburgh EH4 2XR, Midlothian, Scotland; [Selli, Cigdem; Erac, Yasemin; Tosun, Metiner] Ege Univ, Dept Pharmacol, Fac Pharm, TR-35040 Izmir, Turkey; [Tosun, Metiner] Izmir Univ Econ, Fac Med, TR-35330 Izmir, Turkey en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q2
gdc.description.volume 23 en_US
gdc.description.wosquality Q4
gdc.identifier.openalex W2559720597
gdc.identifier.pmid 27981039
gdc.identifier.wos WOS:000390112500001
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.accesstype GOLD
gdc.oaire.diamondjournal false
gdc.oaire.downloads 4
gdc.oaire.impulse 1.0
gdc.oaire.influence 2.6551634E-9
gdc.oaire.isgreen true
gdc.oaire.keywords Huh7
gdc.oaire.keywords RTCA
gdc.oaire.keywords A7r5
gdc.oaire.keywords Research
gdc.oaire.keywords Impedance
gdc.oaire.keywords Cell density
gdc.oaire.popularity 3.1600687E-9
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 0303 health sciences
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.views 3
gdc.openalex.collaboration International
gdc.openalex.fwci 0.3391
gdc.openalex.normalizedpercentile 0.69
gdc.opencitations.count 5
gdc.plumx.crossrefcites 1
gdc.plumx.mendeley 17
gdc.plumx.pubmedcites 4
gdc.plumx.scopuscites 7
gdc.scopus.citedcount 7
gdc.virtual.author Tosun, Metiner
gdc.wos.citedcount 6
relation.isAuthorOfPublication a6ae1a59-457a-40ff-b633-f2e195857bac
relation.isAuthorOfPublication.latestForDiscovery a6ae1a59-457a-40ff-b633-f2e195857bac
relation.isOrgUnitOfPublication 7a5eb8ab-9027-4de1-a0f7-6b2f83c964b8
relation.isOrgUnitOfPublication fbc53f3e-d1d3-4168-afd8-e42cd20bddd9
relation.isOrgUnitOfPublication e9e77e3e-bc94-40a7-9b24-b807b2cd0319
relation.isOrgUnitOfPublication.latestForDiscovery 7a5eb8ab-9027-4de1-a0f7-6b2f83c964b8

Files

Original bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
2272.pdf
Size:
4.05 MB
Format:
Adobe Portable Document Format