Minimally Invasive Detection of Idh1 Mutation With Cell-Free Circulating Tumor Dna and D-2 D/L-2-hydroxyglutarate Ratio in Gliomas

dc.contributor.author Tuna, Gamze
dc.contributor.author Dal-Bekar, Nazli Ecem
dc.contributor.author Akay, Ali
dc.contributor.author Ruksen, Mete
dc.contributor.author Islekel, Sertac
dc.contributor.author Islekel, Gul Huray
dc.date.accessioned 2023-06-16T14:25:02Z
dc.date.available 2023-06-16T14:25:02Z
dc.date.issued 2022-05-18
dc.description.abstract Isocitrate dehydrogenase-1 (IDH1) mutation is accepted as one of the earliest events in tumorigenesis in gliomas. This mutation causes preferential accumulation of D- relative to L-enantiomer of 2-hydroxyglutarate (2-HG). Minimally invasive techniques to detect IDH1 mutation may prove useful for clinical practice. We adopted 2 different diagnostic approaches to detect IDH1 mutation status in glioma patients: Evaluation of D- and L-2-HG levels in cerebrospinal fluid (CSF), urine, and plasma, and identification of IDH1 mutation using cell-free circulating tumor DNA (ctDNA) in CSF and plasma. Forty-nine glioma patients in different stages were included. Levels of D- and L-2-HG were determined using liquid chromatography-tandem mass spectrometry; IDH1 R132H mutation was determined by digital-PCR. D-2-HG levels and D/L-2-HG ratio (rDL) in CSF and rDL in plasma were significantly higher in the mutant group than in the wild-type group (p = 0.029, 0.032, 0.001, respectively). The IDH1 mutation detection rates in CSF- and plasma-ctDNA were 63.2% and 25.0%, respectively. These data indicate that D-2-HG values in CSF and rDL in plasma and CSF can be considered as significant contributors to the identification of IDH1 mutation status. In addition, detection of IDH1 mutation in CSF-ctDNA from glioma patients provides a basis for future use of ctDNA for minimally invasive clinical assessment of gliomas. en_US
dc.description.sponsorship Dokuz Eylul University Scientific Research Projects Coordination Unit [2018, KB.SAG.087] en_US
dc.description.sponsorship This research was supported by a grant from the Dokuz Eylul University Scientific Research Projects Coordination Unit (project number: 2018.KB.SAG.087). en_US
dc.description.sponsorship This research was supported by a grant from the Dokuz Eylul University Scientific Research Projects Coordination Unit (project number: 2018.KB.SAG.087). The authors would like to extend special thanks to Dr Eren Demirtaş of the Mikro Medical Pathology Laboratory, Izmir, Turkey for performing immunohistochemistry studies of patients and Dr Gültekin Taş of the Kent Hospital, Izmir, Turkey for sample storage.
dc.description.sponsorship Kent Hospital; Dokuz Eylül Üniversitesi, (KB.SAG.087); Dokuz Eylül Üniversitesi
dc.identifier.doi 10.1093/jnen/nlac036
dc.identifier.issn 0022-3069
dc.identifier.issn 1554-6578
dc.identifier.scopus 2-s2.0-85132453496
dc.identifier.uri https://doi.org/10.1093/jnen/nlac036
dc.identifier.uri https://hdl.handle.net/20.500.14365/1837
dc.language.iso en en_US
dc.publisher Oxford Univ Press Inc en_US
dc.relation.ispartof Journal of Neuropathology And Experımental Neurology en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Cell-free circulating tumor DNA en_US
dc.subject D en_US
dc.subject L-2-hydroxyglutarate ratio en_US
dc.subject D-2-hydroxyglutarate en_US
dc.subject Gliomas en_US
dc.subject IDH1 mutation en_US
dc.subject L-2-hydroxyglutarate en_US
dc.subject Liquid biopsy en_US
dc.subject Central-Nervous-System en_US
dc.subject Urinary 2-Hydroxyglutarate en_US
dc.subject Classification en_US
dc.subject Plasma en_US
dc.subject D/L-2-Hydroxyglutarate Ratio
dc.subject L-2hydroxyglutarate
dc.title Minimally Invasive Detection of Idh1 Mutation With Cell-Free Circulating Tumor Dna and D-2 D/L-2-hydroxyglutarate Ratio in Gliomas en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id TUNA, GAMZE/0000-0002-7311-4020
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gdc.author.scopusid 57224857334
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gdc.author.scopusid 56619823200
gdc.author.scopusid 57756658300
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gdc.author.wosid TUNA, GAMZE/Q-1951-2019
gdc.author.wosid Dal-Bekar, Nazli Ecem/JVZ-9763-2024
gdc.author.wosid Akay, Ali/F-8135-2019
gdc.bip.impulseclass C4
gdc.bip.influenceclass C5
gdc.bip.popularityclass C4
gdc.coar.access metadata only access
gdc.coar.type text::journal::journal article
gdc.collaboration.industrial false
gdc.description.department İEÜ, Sağlık Bilimleri Fakültesi, Sağlık Yönetimi Bölümü en_US
gdc.description.departmenttemp [Tuna, Gamze; Dal-Bekar, Nazli Ecem; Islekel, Gul Huray] Dokuz Eylul Univ, Inst Hlth Sci, Dept Mol Med, Izmir, Turkey; [Akay, Ali] Izmir Univ Econ, Dept Neurosurg, Med Pk Hosp, Izmir, Turkey; [Ruksen, Mete; Islekel, Sertac] Kent Hosp, Dept Neurosurg, Izmir, Turkey; [Islekel, Gul Huray] Dokuz Eylul Univ, Fac Med, Dept Med Biochem, Izmir, Turkey en_US
gdc.description.endpage 510 en_US
gdc.description.issue 7 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q3
gdc.description.startpage 502 en_US
gdc.description.volume 81 en_US
gdc.description.woscitationindex Science Citation Index Expanded
gdc.description.wosquality Q2
gdc.identifier.openalex W4280501330
gdc.identifier.pmid 35582888
gdc.identifier.wos WOS:000796944900001
gdc.index.type WoS
gdc.index.type Scopus
gdc.index.type PubMed
gdc.oaire.accesstype HYBRID
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gdc.oaire.impulse 12.0
gdc.oaire.influence 2.7075906E-9
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gdc.oaire.keywords Glutarates
gdc.oaire.keywords Brain Neoplasms
gdc.oaire.keywords Mutation
gdc.oaire.keywords Humans
gdc.oaire.keywords Glioma
gdc.oaire.keywords Isocitrate Dehydrogenase
gdc.oaire.keywords Circulating Tumor DNA
gdc.oaire.popularity 1.0764241E-8
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.sciencefields 0302 clinical medicine
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gdc.opencitations.count 8
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gdc.scopus.citedcount 11
gdc.virtual.author Akay, Ali
gdc.virtual.author İşlekel, Sertaç
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