| Issue Date | Title | Author(s) |
| 2017 | 3D dendritic spine segmentation using nonparametric shape priors | Bocugoz E.; Erdil E.; Argunsah A.O.; Unay D. ; Cetin M. |
| 2020 | Accurate Dictionary Matching for Mr Fingerprinting Using Neural Networks and Feature Extraction | Soyak R.; Ersoy E.O.; Navruz E.; Fakultesi M.; Unay D. ; Oksuz I. |
| 2021 | Apal: Adjacency Propagation Algorithm for Overlapping Community Detection in Biological Networks | Doluca, Osman ; Oguz, Kaya |
| 2022 | An Assessment of Linear and Nonlinear Features for Detecting Olfactory Stimulus in Eeg | Akbugday, Burak ; Akan, Aydin ; Pehlivan, Sude ; Sadighzadeh, Reza |
| 2022 | Autophagy-Related Genes Affect the Survival of Multiple Myeloma Patients Depending on Chromosomal Abnormality | Ayna Duran, Gizem ; Benderli Cihan, Yasemin |
| 2025 | Bioinformatics Based Drug Repurposing Approach for Breast and Gynecological Cancers: Recql4/Fam13c Genes Address Common Hub Genes and Drugs | Ayna Duran, Gizem |
| 2018 | Blockchain Applications in Healthcare | Ekin A. ; Unay D. |
| 2020 | Brief Fine Polishing of Thin-Film Gold Electrode Sensors Leads To Better Reproducibility Than Electrochemical Pretreatment | Kilic, Yalin ; Manickham, Pandiaraj; Bhansali, Shekhar |
| 2018 | A Carboxylate-Bridged Mn(ii) Compound With 6-methylanthranilate/Bipy: Oxidation of Alcohols/Alkenes and Catalase-Like Activity | Kilic, Yalcin ; Bolat, Serkan ; Kani, Ibrahim |
| 2019 | Cell Segmentation of 2d Phase-Contrast Microscopy Images With Deep Learning Method | Ayanzadeh, Aydin; Yagar, Huseyin Onur; Ozuysal, Ozden Yalcin; Okvur, Devrim Pesen; Toreyin, Behcet Ugur; Unay, Devrim ; Onal, Sevgi |
| 2022 | Channel Attention Networks for Robust Mr Fingerprint Matching | Soyak, Refik; Navruz, Ebru; Ersoy, Eda Ozgu; Cruz, Gastao; Prieto, Claudia; King, Andrew P.; Unay, Devrim |
| 2023 | Characterization of Cisplatin Loaded Hydrophilic Glycol Chitosan Modified Eumelanin Nanoparticles for Potential Controlled-Release Application | Atik, Aleyna; Günal, Tuğce; Acar Bozkurt, Pınar; Kose, Sila Naz ; Alp, Burcak ; Yandım, Cihangir ; Kaleli, Nurettin Mete |
| 2024 | Circulating Tumour Cells Differentially Express Upregulated Cancer Biomarkers “lncrnas and Mirnas” Compared To Bone Marrow Biopsy Samples in Multiple Myeloma Patients | Ayna Duran, Gizem |
| 2023 | Combinations of Eeg Topographic Feature Maps for the Classification of Adhd | Pehlivan, Sude ; Akdemir, Onur; Cura, O.K.; Akbuğday, Burak ; Akan, Aydın |
| 2019 | Combining Nonparametric Spatial Context Priors With Nonparametric Shape Priors for Dendritic Spine Segmentation in 2-Photon Microscopy Images | Erdil E.; Ozgurargunsah A.; Tasdizen T.; Unay D. ; Cetin M. |
| 2022 | Comparing the Significance of the Utilization of Next Generation and Third Generation Sequencing Technologies in Microbial Metagenomics | Akacin, Ilayda; Ersoy, Şeymanur; Doluca, Osman ; Gungormusler, Mine |
| 2021 | A Comprehensive Drug Repurposing Study for Covid19 Treatment: Novel Putative Dihydroorotate Dehydrogenase Inhibitors Show Association To Serotonin-Dopamine Receptors | Berber, Burak; Doluca, Osman |
| 2024 | Computational Identification and Illustrative Standard for Representation of Unimolecular G-Quadruplex Secondary Structures (ciis-Gq) | Direk, Tugay ; Doluca, Osman |
| 2016 | Consistent Estimation of Complete Neuronal Connectivity in Large Neuronal Populations Using Sparse Shotgun Neuronal Activity Sampling | Mishchenko, Yuriy |
| 2021 | Coronavirus Disease 2019 (covid-19): Biophysical and Biochemical Aspects of Sars-Cov and General Characteristics | Guler, Gunnur ; Ozdemir, Helin; Omar, Dilara; Akdogan, Gul |
| 2017 | Coupled Shape Priors for Dynamic Segmentation of Dendritic Spines | Atabakilachini N.; Erdil E.; Argunsah A.O.; Rada L.; Unay D. ; Cetin M. |
| 2017 | Crosslinking of Poly(vinyl Alcohol) Nanofibres With Polycarboxylic Acids: Biocompatibility With Human Skin Keratinocyte Cells | Cay, Ahmet; Kumbasar, E. Perrin Akcakoca; Keskin, Zalike ; Akduman, Cigdem; Urkmez, Aylin Sendemir |
| 2018 | Daha Verimli Noninvaziv Beyin Makine Arayüzlerinin Geliştirilmesi | Kaya, Murat; Yanar, Hilmi; Özbay, Erkan; Sürmeli, Umut; Sağlam, Emre; Mishchenko, Yuriy ; Yılmaz, Zehra |
| 2017 | Dark Matter Phenomenology of High-Speed Galaxy Cluster Collisions | Mishchenko, Yuriy ; Ji, Chueng-Ryong |
| 2019 | Deep Learning Based Melanoma Detection From Dermoscopic Images | Berkay M.; Mergen E.H.; Binici R.C.; Bayhan Y.; Gungor A.; Okur E. ; Unay D. ; Türkan, Mehmet |
| 2020 | Demonstration of G-Quadruplex Hybridization Chain Reaction for Nucleic Acid Detection | Kanat B.; Portakal, Hüseyin Saygın ; Doluca, Osman |
| 2016 | Dendritic Spine Classification Based on Two-Photon Microscopic Images Using Sparse Representation | Ghani M.U.; Kanik S.D.; Argunşah A.O.; Israely I.; Ünay D. ; Çetin M. |
| 2017 | Dendritic Spine Classification Using Shape and Appearance Features Based on Two-Photon Microscopy | Ghani, Muhammad Usman; Mesadi, Fitsum; Kanik, Sumeyra Demir; Argunsah, Ali Oezguer; Hobbiss, Anna Felicity; Israely, Inbal; Unay, Devrim |
| 2016 | Dendritic Spine Shape Analysis Using Disjunctive Normal Shape Models | Ghani, Muhammad Usman; Mesadi, Fitsum; Kanik, Sumeyra Demir; Argunsah, Ali Ozgur; Israely, Inbal; Unay, Devrim ; Tasdizen, Tolga |
| 2016 | Dendritic Spine Shape Analysis: a Clustering Perspective | Ghani M.U.; Erdil E.; Kanık S.D.; Argunşah A.Ö.; Hobbiss A.F.; Israely I.; Ünay D. |
| 2017 | Design of an Accessible, Powered Myoelectrically Controlled Hand Prosthesis | Akirmak, Osman Onur; Tatar, Cagdas; Altun, Ziya Gokalp; Mishchenko, Yuriy |
| 2023 | Detection of Attention Deficit Hyperactivity Disorder by Using Eeg Feature Maps and Deep Learning | Akbuğday, Burak ; Bozbas, O. A.; Cura, O.K.; Pehlivan, Sude ; Akan, Aydın |
| 2023 | Determination of Eight Hub Genes and Functional Pathways Affecting Both the Survival of Early- and Late-Stage Colon Cancer Patients | Ayna Duran, Gizem ; Sert, Fatma |
| 2019 | Developing a Three- To Six-State Eeg-Based Brain-Computer Interface for a Virtual Robotic Manipulator Control | Mishchenko, Yuriy ; Kaya, Murat; Ozbay, Erkan; Yanar, Hilmi |
| 2019 | Distinguishing Mental Attention States of Humans Via an Eeg-Based Passive Bci Using Machine Learning Methods | Aci, Cigdem Ivan; Kaya, Murat; Mishchenko, Yuriy |
| 2020 | The Effect of Extracellular Matrix on the Differentiation of Mouse Embryonic Stem Cells | Özdil, Berrin; Guler, Gunnur ; Acikgoz, Eda; Kocaturk, Duygu Calik; Aktug, Huseyin |
| 2020 | Effect of Flavopiridol on Cell Cycle, Apoptosis and Biomolecule Structure Changes in Breast Cancer Stem Cells | Acikgoz, Eda; Guler, Gunnur ; Oktem, Gulperi |
| 2020 | Elektroensefalografi Beyin-makine Arayüzlerin Modellemesi | Mishchenko, Yuriy ; Yıldız, Zehra |
| 2022 | Enhancing Two-Photon Images for Anatomical Visualisation Using Super-Resolution | Aydeniz, Burhan; Metin, Safa Can; Turkan, Mehmet ; Unay, Devrim ; Karayannis, Theofanis; Argunsah, Ali Ozgur |
| 2023 | Evaluation of Lateral Flow and Elisa Techniques for Detecting Igg and Igm Antibodies in Covid-19 Cases in Turkiye | Arikan, Ayse; Doluca, Osman ; Akhan, Sila; Sanlidag, Tamer; Sayan, Murat |
| 2018 | An Evaluation on the Robustness of Five Popular Keypoint Descriptors To Image Modifications Specific To Laser Scanning Microscopy | Unay, Devrim ; Stanciu, Stefan G. |
| 2022 | Extending Apal To Detect Overlapping Communities in Weighted Networks | Oğuz, Kaya ; Doluca, Osman |
| 2021 | Fluorene/Fluorenone Carboxamide Derivatives as Selective Light-Up Fluorophores for C-Myc G-Quadruplex | Duyar, Halil; Portakal, Hüseyin Saygın ; Yalcin, Ergin; Kanat, Beyza; Doluca, Osman ; Seferoglu, Zeynel |
| 2021 | Fluorescence, Uv-Vis and Molecular Docking Studies on Trastuzumab-Ligand Interactions | Kaptan, Altan; Pacali, Nilufer; Hurma, Yaren; Guler, Gunnur |
| 2019 | G-Quadruplex Enrichment Analysis Reveals Their Role as Intronic Regulatory Elements in Plants | Doluca, Osman |
| 2016 | G-Quadruplex Prediction in E. Coli Genome Reveals a Conserved Putative G-Quadruplex Switch | Kaplan, Oktay I.; Berber, Burak; Hekim, Nezih; Doluca, Osman |
| 2019 | G4catchall: a G-Quadruplex Prediction Approach Considering Atypical Features | Doluca, Osman |
| 2024 | Identification of Potential Inhibitors for Drug Resistance in Acute Lymphoblastic Leukemia Through Differentially Expressed Gene Analysis and in Silico Screening | Özay, Başak; Tükel, Ezgi Yağmur; Ayna Duran, Gizem ; Kiraz, Yağmur |
| 2021 | Impact of Flanking Nucleotides on G-Quadruplex Topology | Arkan, Yaren; Yesilyurt, Yagmur; Gunay, Beliz; Cogun, Yaren; Doluca, Osman |
| 2020 | Investigation of Compatibility of Severe Acute Respiratory Syndrome Coronavirus 2 Reverse Transcriptase-Pcr Kits Containing Different Gene Targets During Coronavirus Disease 2019 Pandemic | Sarigul, Figen; Doluca, Osman ; Akhan, Sila; Sayan, Murat |
| 2020 | Ir Spektroskopi Kullanılarak İn Vitro Meme Kanser Kök Hücrelerinin Araştırılması | Öktem, Gülperi; Güven, Ümmü; Açıkgöz, Eda; Güler, Günnur |
| 2017 | İki-foton Mikroskopi Görüntülerinde Dendrit Dikenlerinin Otomatik Olarak Bölütlendirilmesi, Sını?andırılması ve Takibi için Olasılık ve Makine Öğrenmesi Temelli Yöntemler | Israely, Inbal; Ghanı, Muhammad Usman; Atabakılachını, Naeimeh; Kılıç, Bike; Ünay, Devrim ; Argunşah, Ali Özgür; Çetin, Müjdat |
| 2019 | İnsan Genomunda Bulunan G-dörtlülerinin Sınıflandırılarak Korunmuş Motiflerin Keşfi ve Varyantlarının Analizi | Kaplan, Oktay İsmail; Doluca, Osman |
| 2024 | Kolanjiyokarsinom ve Hepatoselüler Karsinom Hastalarında Farklı Genler Tarafından Tetiklenen Ortak Biyolojik Yolaklar | Ayna Duran, Gizem |
| 2018 | A Large Electroencephalographic Motor Imagery Dataset for Electroencephalographic Brain Computer Interfaces | Kaya, Murat; Binli, Mustafa Kemal; Ozbay, Erkan; Yanar, Hilmi; Mishchenko, Yuriy |
| 2022 | Low-Cost High-Resolution Potentiostat for Electrochemical Detection of Nucleic Acids and Biomolecular Interactions | Demirhan, Alper; Eksin, Ece; Kilic, Yalin ; Erdem, Arzum |
| 2016 | Manual and Automatic Size Measurement of Lateral Ventricle and Central Sulci and Their Compliance With Atrophy Grade | Gökay G.; Kandemir M.; Tepe M.S.; Yalçiner B.; Ünay D. |
| 2015 | MANUAL AND AUTOMATIC SIZE MEASUREMENT OF LATERAL VENTRICLES AND CENTRAL SULCI AND THEIR COMPLIANCE WITH ATROPHY GRADE | Gokay, Gokhan; Kandemir, Melek; Tepe, M. Savas; Yalciner, Betul; Unay, Devrim |
| 2019 | Medical Decision Support Using Increasingly Large Multimodal Data Sets | Müller H.; Ünay D. |
| 2017 | Mn(ii) Complexes, [mn2(mu-R1c6h3coo) 2(r2) 4].2(clo4), (r1: Cl, Nh2, Ch3); R2: 1,10 '-phenanthroline or 2,2 '-bipyridine): Synthesis, Oxidation of Alcohols/Alkenes and Catalase Activity | Avan, Ilker; Kilic, Yalcin ; Kani, Ibrahim |
| 2019 | Modified Visual Magnetic Resonance Rating Scale for Evaluation of Patients With Forgetfulness | Yalciner, Betul Z.; Kandemir, Melek; Taskale, Sencan; Tepe, Savas M.; Unay, Devrim |
| 2020 | Neumodx Random Access Molecular Diagnostic System for Detection and Quantification of Hepatitis B Virus in Clinical Samples | Arikan, Ayse; Sayan, Murat; Doluca, Osman |
| 2017 | Nonparametric Joint Shape and Feature Priors for Image Segmentation | Erdil, Ertunc; Ghani, Muhammad Usman; Rada, Lavdie; Argunsah, Ali Ozgur; Unay, Devrim ; Tasdizen, Tolga; Cetin, Mujdat |
| 2016 | Nonparametric Joint Shape and Feature Priors for Segmentation of Dendritic Spines | Erdil, Ertunc; Rada, Lavdie; Argunsah, A. Ozgur; Israely, Inbal; Unay, Devrim ; Tasdizen, Tolga; Cetin, Mujdat |
| 2018 | A Novel and Synthetically Facile Coumarin-Thiophene Schiff Base for Selective Fluorescent Detection of Cyanide Anions in Aqueous Solution: Synthesis, Anion Interactions, Theoretical Study and Dna-Binding Properties | Chemchem, Meryem; Yahaya, Issah; Aydiner, Burcu; Seferoglu, Nurgul; Doluca, Osman ; Merabet, Naima; Seferoglu, Zeynel |
| 2017 | Novel Keratin Modified Bacterial Cellulose Nanocomposite Production and Characterization for Skin Tissue Engineering | Keskin, Zalike ; Urkmez, Aylin Sendemir; Hames, E. Esin |
| 2021 | A Novel Method for Conserved Sequence Extraction With Prospective Mutation Prediction for Sars-Cov Pcr Primer Design | Portakal, Saygin Huseyin ; Kanat, Beyza; Sayan, Murat; Berber, Burak; Doluca, Osman |
| 2016 | On Comparison of Manifold Learning Techniques for Dendritic Spine Classification | Ghani, Muhammad Usman; Argunsach, Ali Ozgur; Israely, Inbal; Unay, Devrim ; Tasdizen, Tolga; Cetin, Mujdat |
| 2022 | <p>dna Binding Effects of 2,2'-bipyridine and 1,10-Phenanthroline Ligands Synthesized With Benzimidazole Copper (ii) Complexes: Crystal Structure, Molecular Docking, Dna Binding and Anti-Cancer Studies</P> | Unver, Hakan; Berber, Burak; Kanat, Beyza; Arafat, Mahmoud; Koparal, Ayse Tansu; Doluca, Osman |
| 2023 | Pan-Cancer Analyses Identify the Rrm2 Gene as a Biomarker With Diagnostic and Prognostic Roles in Multiple Human Cancers Via Interactions With the Hsa-Let Mirna and Ezh2 | Ayna Duran, Gizem |
| 2018 | A passive brain-computer interface for monitoring mental attention state | Kaya M. ; Aci C.; Mishchenko, Yuriy |
| 2019 | A Pattern Mining Approach in Feature Extraction for Emotion Recognition From Speech | Avcı, Umut; Akkurt, Gamze; Unay, Devrim |
| 2019 | The Performance of Local-Learning Based Clustering Feature Selection Method on the Diagnosis of Parkinson's Disease Using Structural Mri | Cigdem, Ozkan; Demirel, Hasan; Unay, Devrim |
| 2020 | Quantitative Determination of H2o2 for Detection of Alanine Aminotransferase Using Thin Film Electrodes | Saygili, Ecem; Orakci, Beyza; Koprulu, Melisa; Demirhan, Alper; Ilhan-Ayisigi, Esra; Kilic, Yalin ; Yesil-Celiktas, Ozlem |
| 2022 | Realtime Determination of Mood in Classroom Environment | Yurdakul, Eda; Ergun, Efe; Yildiz, Can; Akbugday, Burak ; Akan, Aydin ; Sokucu, Taha; Pehlivan, Sude |
| 2018 | Relaxed Formation Rules for G-Quadruplex Prediction | Doluca, Osman |
| 2017 | Retrieval From and Understanding of Large-Scale Multi-Modal Medical Datasets: a Review | Mueller, Henning; Unay, Devrim |
| 2018 | Robustness of Sift Feature Descriptors To Imaging Parameters in Laser Scanning Microscopy | Ünay D. ; Stanciu S.G. |
| 2018 | Selective Catalytic Oxidation of Alkenes Employing Homobinuclear Manganese(ii) Catalysts With Tbhp | Kilic, Yalcin ; Kani, Ibrahim |
| 2022 | Sequence Based Prediction of Protein-Protein Interactions Via Siamese Neural Networks | Geckin, Duygu ; Demir, Guleser Kalayci |
| 2023 | Specific Binding of D-Amino Neuraminic Acid To Ganglioside Studied in Prostate Cancer Cells | Yiğittürk, Gürkan; Rouhrazi, Hadi; Aktuğ, Hüseyin; Güler, Günnur ; Demir, Kenan; Açıkgöz, Eda |
| 2020 | Substituent Dependent Selectivity of Fluorescent Chemosensors Derived From Coumarin for Biologically Relevant Dna Structures and Anions | Chemchem, Meryem; Yahaya, Issah; Aydiner, Burcu; Doluca, Osman ; Seferoglu, Nurgul; Seferoglu, Zeynel |
| 2020 | Synthesis and Characterization of Folic Acid-Chitosan Nanoparticles Loaded With Thymoquinone To Target Ovarian Cancer Cells | Ince, Iskender; Yildirim, Yeliz; Guler, Gunnur ; Medine, Emin Ilker; Ballica, Gulsah; Kusdemir, Bekir Cem; Goker, Erdem |
| 2020 | Synthesis, Biological Properties, and Acid Dissociation Constant of Novel Naphthoquinone-Triazole Hybrids | Nural, Yahya; Ozdemir, Sadin; Doluca, Osman ; Demir, Bunyamin; Yalcin, Mustafa Serkan; Atabey, Hasan; Kanat, Beyza |
| 2018 | Tracking-Assisted Detection of Dendritic Spines in Time-Lapse Microscopic Images | Rada, Lavdie; Kilic, Bike; Erdil, Ertunc; Ramiro-Cortes, Yazmin; Israely, Inbal; Unay, Devrim ; Cetin, Mujdat |
| 2019 | Triplex-Forming Dna Probe Approach for Silver Detection and the Effect of C-G·c Triplet Distribution on Triplex Stability | Doluca, Osman |
| 2024 | Understanding Intercalative Modulation of G-Rich Sequence Folding: Solution Structure of a Tina-Conjugated Antiparallel Dna Triplex | Garavis, Miguel; Edwards, Patrick J. B.; Serrano-Chacon, Israel; Doluca, Osman ; Filichev, Vyacheslav V.; Gonzalez, Carlos |
| 2024 | Upregulated Acute Systemic Inflammation-Related Genes Based on Endotoxin Exposure Provide “survival Benefit” or Create “high Risk of Death” in Leukaemia and Colon Cancer | Ayna Duran, Gizem |
| 2023 | Using Custom-Built Primers and Nanopore Sequencing To Evaluate Co-Utilizer Bacterial and Archaeal Populations Linked To Bioh2 Production | Akaçin, İ.; Ersoy, Ş; Doluca, Osman ; Güngörmüşler, Mine |
